Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879169.1_cds_XP_016437025.1_32822
CDS Infomation

[gene=LOC107763100] [db_xref=GeneID:107763100] [protein=protein DJ-1 homolog B-like] [protein_id=XP_016437025.1] [location=join(1903..2067,2143..2343,3340..3489,3589..3771,4502..4582,9774..9974,10047..10187,10482..10679)] [gbkey=CDS]
Sequence

ATGGCAGCACCAGTAATGCGCCACCTCACTCCCGTCCCTTCTTCCTTTATAAAACTCCAA
TTACTCTCCCAAAGCCACTCATTTTTCACTCTCTCCGCTCCTCGTAAGAAGAAACGATTC
TCCCTCGTAACTTCATTTTCAGTCATGGCTTCTGCTACTAAGAAGGTATTGGTTCCGATT
GCGAACGGAACCGAGCCGATTGAGGCTATAGTGCCCATAGATATTTTGCGGAGAGCTGGT
GCGGAGGTTACTGTTGCCTCAGTTGAGAAGCAGCTTCAGATTGAAGGAGTGCACGGAATT
AAGATCGTTGCCGATGCTCTAATTTCTGATTGTGCGGATACTGAATTCGACCTTATCTCA
CTTCCGGGAGGGATTCCTGGTGCAACCAACCTAAGGAATTGCAAGACTTTGGAAAGCATA
GTAAAAAAGCAAGCTGAAAATGGACGGTTTTATGCTGCAATATGCGCTGCTCCTGCTGTA
GCACTTGGATCATGGGGGCTTCTGAAGGGGCTGAAAGCAACATGTTATCCGTCGTATATG
GAGGAACTATCATCTTATACCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGGAACAGTT
GTGACAAGTCGAGGACCAGGAACTGCGATCGAGTATGCTGTTGCATTGGTTGAGGAGTTG
TATGGAAAAGAGAAGGCTGATGAAGTTTCTGGCCCACTCGTGATGCGCCCAAATCACATC
GAAGAATTTGCATTTGCTGAGCTCAATTCAGTAAATTGGACATTTACGAGTAAGCCACAG
ATTCTTGTACCTATTGCGAATGGTTCTGAGGAAATTGAAGCAGCTACTATTATCGATGTA
CTTCGACGAGCAAATGCTCAAGTAGTAGTGGCATCTTTGGAAGATACATTGGAGATTGTC
GCTTCCAGAAAAGTTAAGCTAGTAGCAGATGTGCTCCTTGATGAAGCTGCTAAGCAGTCA
TATGATCTTATCGTCCTGCCGGGTGGTCTTGGCGGTGCCCAAGCATTTGCCAACTCAGAA
AAGTTGGTTGACATGCTGAAGAAGCAGAGAGAATCAAGCAAACCGTATGGAGCAATGTGT
GCATCTCCGGCTCTAGTCCTAGAGCACCATGGGTTGCTCAAGGGTAAAAAGGCTACTGCC
TTTCCAGCTATGTGCAATAAGCTCTCAGATCCAAGCGAAGCAGAAAATAGGGTGTTGGTT
GATGGCAATCTTGTTACTAGCAGAGGACCAGGAACTACCATGGAGTTTGCACTGGCCATT
GCAGATAAGTTTATTGGCCGCAAGGAAGTACTAGTGCTAGCAAAGAAGATGGTTTTCTAA

Peptide Sequence

PEP ID

XP_016437025.1
PEP Infomation

PREDICTED: protein DJ-1 homolog B-like [Nicotiana tabacum]
Sequence

MAAPVMRHLTPVPSSFIKLQLLSQSHSFFTLSAPRKKKRFSLVTSFSVMASATKKVLVPI
ANGTEPIEAIVPIDILRRAGAEVTVASVEKQLQIEGVHGIKIVADALISDCADTEFDLIS
LPGGIPGATNLRNCKTLESIVKKQAENGRFYAAICAAPAVALGSWGLLKGLKATCYPSYM
EELSSYTIAVESRVQKDGTVVTSRGPGTAIEYAVALVEELYGKEKADEVSGPLVMRPNHI
EEFAFAELNSVNWTFTSKPQILVPIANGSEEIEAATIIDVLRRANAQVVVASLEDTLEIV
ASRKVKLVADVLLDEAAKQSYDLIVLPGGLGGAQAFANSEKLVDMLKKQRESSKPYGAMC
ASPALVLEHHGLLKGKKATAFPAMCNKLSDPSEAENRVLVDGNLVTSRGPGTTMEFALAI
ADKFIGRKEVLVLAKKMVF

Transcript Sequence

Gene sequence data has not been registered.